Homology-directed repair with DharmaconTM Edit-RTM CRISPR-Cas9 reagents and single-stranded DNA oligos

نویسندگان

  • John A. Schiel
  • Eldon Chou
  • Maren Mayer
  • Emily M. Anderson
  • Anja van Brabant Smith
چکیده

CRISPR (clustered regularly interspaced short palindromic repeats)-Cas9 (CRISPR-associated protein 9) is a revolutionary tool that utilizes an RNA-guided nuclease for efficient site-directed genome engineering in various eukaryotic systems. The double-strand breaks (DSBs) created by CRISPR-Cas9 are repaired in the cell by two predominant mechanisms: imprecise non-homologous end joining (NHEJ) and precise homology-directed repair (HDR). The DharmaconTM Edit-RTM CRISPR-Cas9 gene engineering platform consists of both synthetic and expressed guide RNAs. In conjunction with Cas9 expression plasmids and lentiviral particles, it supports multiple experimental workflows. Here we demonstrate an innovative workflow to guide the insertion of 10-12 nucleotides into a gene of interest by HDR with the Edit-R CRISPR-Cas9 system, Dharmacon DharmaFECTTM Duo Transfection Reagent, and a single-stranded donor DNA oligo (ssDNA).

برای دانلود رایگان متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Fluorescent tagging of an endogenous gene by homology-directed repair using DharmaconTM Edit-RTM CRISPR-Cas9 reagents

CRISPR-Cas9 has increased the accessibility of genome engineering due to its ease of use and ability to cause double-strand breaks (DSBs) at almost any locus of interest. The DSB that is created by Cas9, when guided to a specific genomic locus by crRNA and tracrRNA, can be repaired by various pathways, including homology-directed repair (HDR). The choice of repair pathway depends on numerous fa...

متن کامل

Highly Specific and Efficient CRISPR/Cas9-Catalyzed Homology-Directed Repair in Drosophila

We and others recently demonstrated that the readily programmable CRISPR/Cas9 system can be used to edit the Drosophila genome. However, most applications to date have relied on aberrant DNA repair to stochastically generate frameshifting indels and adoption has been limited by a lack of tools for efficient identification of targeted events. Here we report optimized tools and techniques for exp...

متن کامل

Lo et al. GENETICS/2013/155382 Precise and Heritable Genome Editing in Evolutionarily Diverse Nematodes Using TALENs and CRISPR/Cas9 to Engineer Insertions and Deletions

Exploitation of custom-designed nucleases to induce DNA double-strand breaks (DSBs) at genomic locations of choice has transformed our ability to edit genomes, regardless of their complexity. DSBs can trigger either error-prone repair pathways that induce random mutations at the break sites or precise homology-directed repair pathways that generate specific insertions or deletions guided by exo...

متن کامل

Analyses of point mutation repair and allelic heterogeneity generated by CRISPR/Cas9 and single-stranded DNA oligonucleotides

The repair of a point mutation can be facilitated by combined activity of a single-stranded oligonucleotide and a CRISPR/Cas9 system. While the mechanism of action of combinatorial gene editing remains to be elucidated, the regulatory circuitry of nucleotide exchange executed by oligonucleotides alone has been largely defined. The presence of the appropriate CRISPR/Cas9 system leads to an enhan...

متن کامل

Precise and heritable genome editing in evolutionarily diverse nematodes using TALENs and CRISPR/Cas9 to engineer insertions and deletions.

Exploitation of custom-designed nucleases to induce DNA double-strand breaks (DSBs) at genomic locations of choice has transformed our ability to edit genomes, regardless of their complexity. DSBs can trigger either error-prone repair pathways that induce random mutations at the break sites or precise homology-directed repair pathways that generate specific insertions or deletions guided by exo...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

عنوان ژورنال:

دوره   شماره 

صفحات  -

تاریخ انتشار 2015